(Partial) Correlation Network

Description

Build a graph, where each node corresponds to a variable (gene, metabolite or bins) and a pair of nodes is connected with an undirected edge if their pair-wise expression similarity is above a particular threshold (Pearson, Spearman or Kendall correlation). See Correlation and dependence, Partial correlation, Dependency network

Usage

Field	Description
Launch	Field indicating whether you want to execute this analysis in the workflow (checked) or not (unchecked).

to finish …

Output Examples

- General Information 
	Partial Correlation =  1 
	Correlation Method =  pearson 
	shrinkage intensity lambda =  0 
	Correction P-value Method =  fdr 
	Maximum P-value =  0.05 
	Corr. min =  0.4841662 

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- Full Graph 
	Nb Cliques =  4 
	Nb Nodes =  27 
	Nb Edges =  24 
	Graph Density =  0.06837607